VABRA 1.2 RC (VABRA)

IACL.Registration.Volume

[edu.jhu.ece.iacl.plugins.registration.MedicAlgorithmVABRA]

Description

Vectorized Adaptive Bases Registration Algorithm - A deformable registration algorithm. Returns registered image and the applied deformation field.

Notes

This is a port of Bryan Wheeler's VABRA. The Java implementation never achieved exact numerical equivalence with the C++ version, but the final results are close enough to conclude the algorithms produce the same results.

Inputs

Name Default Type File Extension Description
Subjects
    		VolumeCollection - Subjects
    Subject Weights NumberCollection - Subject Weights
    Targets
      		VolumeCollection - Targets
      Target Weights NumberCollection - Target Weights
      Configuration /home/VANDERBILT/landmaba/jist/build/jist-bin-modules/edu/jhu/ece/iacl/algorithms/vabra/config.xmlFile - Configuration
      Type for Channel 1 0:TriLinearOption
      1. 0:TriLinear
      2. 1:NNI
      		 - Type for Channel 1
      Type for Channel 2 0:TriLinearOption
      1. 0:TriLinear
      2. 1:NNI
      		 - Type for Channel 2
      Type for Channel 3 0:TriLinearOption
      1. 0:TriLinear
      2. 1:NNI
      		 - Type for Channel 3
      Type for Remaining Channels (Use Index from Options Above) (Optional) NumberCollection - Type for Remaining Channels (Use Index from Options Above)
      Percentile of Image Above Robust Maximum (0.0-1.0) 0Double - Percentile of Image Above Robust Maximum (0.0-1.0)
      Percentile of Image Below Robust Minimum (0.0-1.0) 0Double - Percentile of Image Below Robust Minimum (0.0-1.0)
      Number of Bins used in Histogram 64Integer - Number of Bins used in Histogram
      First Run 9-DOF Affine Registration (FLIRT) trueBoolean - First Run 9-DOF Affine Registration (FLIRT)

      Outputs

      Name Type File Extension Description
      Registered Image VolumeCollection - Registered Image
      Deformation Field Volume
      • dim{X,Y,Z,T}
      • type{FLOAT}
      		xml Deformation Field
      Transformation Matrix Matrix - Transformation Matrix
      Execution Time Performance - Execution Time

      Authors

      Last modified by VANDERBILT\landmaba on Thu, 21 Jan 2010 14:27:27 CST