Reorient Volume alpha (reorient)

IACL.Utilities.Volume

[edu.jhu.ece.iacl.plugins.utilities.volume.MedicAlgorithmMipavReorient]

Description

Reorient a volume to a particular anatomical orientation.

Notes

Images are placed in a cannonical orientation, with or without resampling (wrapper for the MIPAV utility).

Inputs

Name Default Type File Extension Description
Source SourceVolume
  • dim{X,Y,Z,1}
  • type{any}
Supported Formats Source
Template (Optional) TemplateVolume
  • dim{X,Y,Z,1}
  • type{any}
Supported Formats Template
New image orientation Dicom axialOption
  1. Dicom axial
  2. Dicom coronal
  3. Dicom sagittal
  4. User defined
 - New image orientation
User defined X-axis orientation (image left to right) UnknownOption
  1. Unknown
  2. Patient Right to Left
  3. Patient Left to Right
  4. Patient Posterior to Anterior
  5. Patient Anterior to Posterior
  6. Patient Inferior to Superior
  7. Patient Superior to Inferior
 - User defined X-axis orientation (image left to right)
User defined Y-axis orientation (image top to bottom) UnknownOption
  1. Unknown
  2. Patient Right to Left
  3. Patient Left to Right
  4. Patient Posterior to Anterior
  5. Patient Anterior to Posterior
  6. Patient Inferior to Superior
  7. Patient Superior to Inferior
 - User defined Y-axis orientation (image top to bottom)
User defined Z-axis orientation (into the screen) UnknownOption
  1. Unknown
  2. Patient Right to Left
  3. Patient Left to Right
  4. Patient Posterior to Anterior
  5. Patient Anterior to Posterior
  6. Patient Inferior to Superior
  7. Patient Superior to Inferior
 - User defined Z-axis orientation (into the screen)
Interpolation Nearest NeighborOption
  1. Nearest Neighbor
  2. Trilinear
  3. Bspline 3rd order
  4. Bspline 4th order
  5. Cubic Lagrangian
  6. Quintic Lagrangian
  7. Heptic Lagrangian
  8. Windowed Sinc
 - Interpolation
Resolution UnchangedOption
  1. Unchanged
  2. Finest cubic
  3. Coarsest cubic
  4. Same as template
 - Resolution

Outputs

Name Type File Extension Description
Reoriented Volume Volume
  • dim{X,Y,Z,1}
  • type{any}
xml Reoriented Volume
Execution Time Performance - Execution Time

Last modified by VANDERBILT\landmaba on Thu, 21 Jan 2010 14:27:27 CST