edu.jhu.ece.iacl.algorithms.dti
Class GTCparams

java.lang.Object
  edu.jhu.ece.iacl.algorithms.dti.GTCparams

public class GTCparams
extends java.lang.Object

Field Summary

java.lang.String	bvals
java.lang.String	date
boolean	DTIstudio
java.lang.String	flag
java.lang.String	fo
java.lang.String	fs
java.lang.String	grad_choice
int	numvolumes
java.lang.String	parfile
java.lang.String	parversion
java.lang.String	patient_orientation
java.lang.String	patient_position
java.lang.String	release
java.lang.String	scanner
java.lang.String	slice_orient
double[][]	sliceAng
boolean	sort_image
java.lang.String	supplied_grad_file
java.lang.String	userTable
java.lang.String	xfmname
java.lang.String	xfmpath

Constructor Summary

GTCparams()

Method Summary

static double[][]	flipComponents(double[][] table, boolean invertx, boolean inverty, boolean invertz)
static double[][]	getHigh()
static double[][]	getHighOP_24prev()
static double[][]	getHighOP_25post()
static double[][]	getHighOP_rel25()
static double[][]	getJones30()
static double[][]	getJones30VMS()
static double[][]	getLow()
static double[][]	getLowOP()
static double[][]	getLowOP2()
static double[][]	getMedium()
static double[][]	getMediumOP()
static double[][]	getMediumOP2()
static double[][]	invertTable(double[][] table)
void	printParams()
void	setFlag(java.lang.String flag)
void	setgrad_choice(java.lang.String grad)
void	setScanner(java.lang.String scanner)
boolean	verifyParams()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

flag

public java.lang.String flag

scanner

public java.lang.String scanner

grad_choice

public java.lang.String grad_choice

fs

public java.lang.String fs

fo

public java.lang.String fo

slice_orient

public java.lang.String slice_orient

sliceAng

public double[][] sliceAng

patient_orientation

public java.lang.String patient_orientation

patient_position

public java.lang.String patient_position

xfmpath

public java.lang.String xfmpath

sort_image

public boolean sort_image

supplied_grad_file

public java.lang.String supplied_grad_file

parfile

public java.lang.String parfile

xfmname

public java.lang.String xfmname

date

public java.lang.String date

parversion

public java.lang.String parversion

bvals

public java.lang.String bvals

DTIstudio

public boolean DTIstudio

numvolumes

public int numvolumes

release

public java.lang.String release

userTable

public java.lang.String userTable

Constructor Detail

GTCparams

public GTCparams()

Method Detail

printParams

public void printParams()

setFlag

public void setFlag(java.lang.String flag)

setScanner

public void setScanner(java.lang.String scanner)

setgrad_choice

public void setgrad_choice(java.lang.String grad)

verifyParams

public boolean verifyParams()

getLowOP

public static final double[][] getLowOP()

getMediumOP

public static final double[][] getMediumOP()

getLowOP2

public static final double[][] getLowOP2()

getMediumOP2

public static final double[][] getMediumOP2()

getHighOP_24prev

public static final double[][] getHighOP_24prev()

getHighOP_rel25

public static final double[][] getHighOP_rel25()

getHighOP_25post

public static final double[][] getHighOP_25post()

getJones30

public static final double[][] getJones30()

getJones30VMS

public static final double[][] getJones30VMS()

getLow

public static final double[][] getLow()

getMedium

public static final double[][] getMedium()

getHigh

public static final double[][] getHigh()

invertTable

public static double[][] invertTable(double[][] table)

flipComponents

public static double[][] flipComponents(double[][] table,
                                        boolean invertx,
                                        boolean inverty,
                                        boolean invertz)