edu.jhu.ece.iacl.jist.structures.image
Class VoxelMipav

java.lang.Object
  java.lang.Number
      edu.jhu.ece.iacl.jist.structures.image.Voxel
          edu.jhu.ece.iacl.jist.structures.image.VoxelMipav

All Implemented Interfaces:

Indexable<Voxel>, java.io.Serializable, java.lang.Cloneable, java.lang.Comparable<Voxel>

public class VoxelMipav
extends Voxel
implements Indexable<Voxel>

An adapter for each element of ModelImage in Mipav so that data does not have to be copied to and from the Model Image class.

Author:

Blake Lucas

See Also:

Serialized Form

Field Summary

protected VoxelType	type The type.
protected Voxel	vox The vox.

Constructor Summary

VoxelMipav(int x, int y, int z, ModelStorageBase img, VoxelType type)
Instantiates a new voxel mipav.

Method Summary

Voxel	add(Voxel v) Adds the.
Voxel	clone()
int	compareTo(Voxel arg0)
Voxel	div(Voxel v) Div.
boolean	getBoolean() Gets the boolean.
int	getChainIndex() Gets the chain index.
java.awt.Color	getColor() Gets the color.
int	getColumn() Gets the column.
double	getDouble() Gets the double.
float	getFloat() Gets the float.
int	getIndex() Get heap index.
int	getInt() Gets the int.
int	getRow() Gets the row.
short	getShort() Gets the short.
int	getSlice() Gets the slice.
VoxelType	getType() Gets the type.
short	getUByte() Gets the u byte.
java.lang.Comparable	getValue() Gets the value.
Voxel	mul(Voxel v) Mul.
Voxel	neg() Neg.
void	set(boolean vox) Sets the.
void	set(java.awt.Color vox) Sets the.
void	set(double vox) Sets the.
void	set(int vox) Sets the.
void	set(short vox) Sets the.
void	set(Voxel v) Sets the.
void	setChainIndex(int chainIndex) Sets the chain index.
void	setIndex(int index) Set index into heap.
void	setRefPosition(int i, int j, int k) Set position in volume.
void	setValue(java.lang.Comparable obj) Sets the value.
Voxel	sub(Voxel v) Sub.
java.lang.String	toString()

Methods inherited from class edu.jhu.ece.iacl.jist.structures.image.Voxel

byteValue, doubleValue, equals, floatValue, getRestriction, getVector, intValue, longValue, round, set, set, set, shortValue

Methods inherited from class java.lang.Object

finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

type

protected VoxelType type

The type.

vox

protected Voxel vox

The vox.

Constructor Detail

VoxelMipav

public VoxelMipav(int x,
                  int y,
                  int z,
                  ModelStorageBase img,
                  VoxelType type)

Instantiates a new voxel mipav.

Parameters:

x - the x

y - the y

z - the z

img - the img

type - the type

Method Detail

getBoolean

public boolean getBoolean()

Description copied from class: Voxel

Gets the boolean.

Specified by:

getBoolean in class Voxel

Returns:

the boolean

getShort

public short getShort()

Description copied from class: Voxel

Gets the short.

Specified by:

getShort in class Voxel

Returns:

the short

getUByte

public short getUByte()

Description copied from class: Voxel

Gets the u byte.

Overrides:

getUByte in class Voxel

Returns:

the u byte

getFloat

public float getFloat()

Description copied from class: Voxel

Gets the float.

Overrides:

getFloat in class Voxel

Returns:

the float

getColor

public java.awt.Color getColor()

Description copied from class: Voxel

Gets the color.

Specified by:

getColor in class Voxel

Returns:

the color

getDouble

public double getDouble()

Description copied from class: Voxel

Gets the double.

Specified by:

getDouble in class Voxel

Returns:

the double

getInt

public int getInt()

Description copied from class: Voxel

Gets the int.

Specified by:

getInt in class Voxel

Returns:

the int

clone

public Voxel clone()

Specified by:

clone in class Voxel

set

public void set(Voxel v)

Description copied from class: Voxel

Sets the.

Specified by:

set in class Voxel

Parameters:

v - the v

set

public void set(boolean vox)

Description copied from class: Voxel

Sets the.

Specified by:

set in class Voxel

Parameters:

vox - the vox

set

public void set(short vox)

Description copied from class: Voxel

Sets the.

Specified by:

set in class Voxel

Parameters:

vox - the vox

set

public void set(int vox)

Description copied from class: Voxel

Sets the.

Specified by:

set in class Voxel

Parameters:

vox - the vox

set

public void set(java.awt.Color vox)

Description copied from class: Voxel

Sets the.

Specified by:

set in class Voxel

Parameters:

vox - the vox

set

public void set(double vox)

Description copied from class: Voxel

Sets the.

Specified by:

set in class Voxel

Parameters:

vox - the vox

add

public Voxel add(Voxel v)

Description copied from class: Voxel

Adds the.

Specified by:

add in class Voxel

Parameters:

v - the v

Returns:

the voxel

sub

public Voxel sub(Voxel v)

Description copied from class: Voxel

Sub.

Specified by:

sub in class Voxel

Parameters:

v - the v

Returns:

the voxel

mul

public Voxel mul(Voxel v)

Description copied from class: Voxel

Mul.

Specified by:

mul in class Voxel

Parameters:

v - the v

Returns:

the voxel

div

public Voxel div(Voxel v)

Description copied from class: Voxel

Div.

Specified by:

div in class Voxel

Parameters:

v - the v

Returns:

the voxel

neg

public Voxel neg()

Description copied from class: Voxel

Neg.

Specified by:

neg in class Voxel

Returns:

the voxel

toString

public java.lang.String toString()

Specified by:

toString in class Voxel

compareTo

public int compareTo(Voxel arg0)

Specified by:

compareTo in interface java.lang.Comparable<Voxel>

setRefPosition

public void setRefPosition(int i,
                           int j,
                           int k)

Description copied from interface: Indexable

Set position in volume.

Specified by:

setRefPosition in interface Indexable<Voxel>

Parameters:

i - row

j - column

k - slice

getRow

public int getRow()

Description copied from interface: Indexable

Gets the row.

Specified by:

getRow in interface Indexable<Voxel>

Returns:

the row

getColumn

public int getColumn()

Description copied from interface: Indexable

Gets the column.

Specified by:

getColumn in interface Indexable<Voxel>

Returns:

the column

getSlice

public int getSlice()

Description copied from interface: Indexable

Gets the slice.

Specified by:

getSlice in interface Indexable<Voxel>

Returns:

the slice

setIndex

public void setIndex(int index)

Description copied from interface: Indexable

Set index into heap.

Specified by:

setIndex in interface Indexable<Voxel>

Parameters:

index - the index

getIndex

public int getIndex()

Description copied from interface: Indexable

Get heap index.

Specified by:

getIndex in interface Indexable<Voxel>

Returns:

the index

getType

public VoxelType getType()

Description copied from class: Voxel

Gets the type.

Specified by:

getType in class Voxel

Returns:

the type

getChainIndex

public int getChainIndex()

Description copied from interface: Indexable

Gets the chain index.

Specified by:

getChainIndex in interface Indexable<Voxel>

Returns:

the chain index

setChainIndex

public void setChainIndex(int chainIndex)

Description copied from interface: Indexable

Sets the chain index.

Specified by:

setChainIndex in interface Indexable<Voxel>

Parameters:

chainIndex - the new chain index

getValue

public java.lang.Comparable getValue()

Description copied from interface: Indexable

Gets the value.

Specified by:

getValue in interface Indexable<Voxel>

Returns:

the value

setValue

public void setValue(java.lang.Comparable obj)

Description copied from interface: Indexable

Sets the value.

Specified by:

setValue in interface Indexable<Voxel>

Parameters:

obj - the new value