edu.jhu.ece.iacl.plugins.registration
Class MedicAlgorithmConstrainedFLIRT

java.lang.Object
  extended by AlgorithmBase
      extended by edu.jhu.ece.iacl.jist.pipeline.ProcessingAlgorithm
          extended by edu.jhu.ece.iacl.plugins.registration.MedicAlgorithmConstrainedFLIRT

public class MedicAlgorithmConstrainedFLIRT
extends ProcessingAlgorithm


Nested Class Summary
protected static class MedicAlgorithmConstrainedFLIRT.AlgorithmConstrainedOAR3DWrapper
           
protected  class MedicAlgorithmConstrainedFLIRT.FlirtWrapper
           
 
Field Summary
 
Fields inherited from class edu.jhu.ece.iacl.jist.pipeline.ProcessingAlgorithm
algorithmInformation, inputParams, JIST_VERSION, outputParams, performance, runningInSeparateProcess
 
Constructor Summary
MedicAlgorithmConstrainedFLIRT()
           
 
Method Summary
protected  void createInputParameters(ParamCollection inputParams)
          Create input parameters.
protected  void createOutputParameters(ParamCollection outputParams)
          Create output parameters.
protected  void execute(CalculationMonitor monitor)
          Execute your algorithm.
 
Methods inherited from class edu.jhu.ece.iacl.jist.pipeline.ProcessingAlgorithm
getAboutFile, getAlgorithmInformation, getAlgorithmLabel, getAlgorithmName, getDefaultJVMArgs, getInput, getMapFile, getOutput, getOutputDirectory, getPreferredSize, getTimeStamp, getUsageFile, init, init, isRunningInSeparateProcess, load, runAlgorithm, runAlgorithm, saveResources, setInput, setMapFile, setOutput, setOutputDirectory, setOutputMetaFile, setPreferredSize, setRunningInSeparateProcess, writeSummaryFile
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

MedicAlgorithmConstrainedFLIRT

public MedicAlgorithmConstrainedFLIRT()
Method Detail

createInputParameters

protected void createInputParameters(ParamCollection inputParams)
Description copied from class: ProcessingAlgorithm
Create input parameters.

Specified by:
createInputParameters in class ProcessingAlgorithm
Parameters:
inputParams - the input parameters

createOutputParameters

protected void createOutputParameters(ParamCollection outputParams)
Description copied from class: ProcessingAlgorithm
Create output parameters.

Specified by:
createOutputParameters in class ProcessingAlgorithm
Parameters:
outputParams - the output parameters

execute

protected void execute(CalculationMonitor monitor)
                throws AlgorithmRuntimeException
Description copied from class: ProcessingAlgorithm
Execute your algorithm.

Specified by:
execute in class ProcessingAlgorithm
Parameters:
monitor - progress monitor
Throws:
AlgorithmRuntimeException - the algorithm runtime exception